Methyl (3R)-3-[(tert-butyldimethylsilyl)oxy]-5-oxo-6-(triphenylphosphoranylidene)hexanoate: Characteristics, Structure, and Importance

What is Methyl (3R)-3-[(tert-butyldimethylsilyl)oxy]-5-oxo-6-(triphenylphosphoranylidene)hexanoate?

Methyl (3R)-3-[(tert-butyldimethylsilyl)oxy]-5-oxo-6-(triphenylphosphoranylidene)hexanoate belongs to a class of specialty organic intermediates, playing a role in the chemical toolbox for synthetic organic chemistry. It features a hexanoate backbone, a tert-butyldimethylsilyl-protected hydroxy group at the third carbon, a 5-oxo function, and a triphenylphosphoranylidene group at the end. The molecule offers strategic sites for chemical manipulation through its silyl-protected alcohol and its phosphoranylidene-derived ylide fragment, favored by organic chemists for controlled reactivity in synthesis protocols.

Detailed Product Properties and Specifications

Handling this compound brings one into contact with a solid or crystalline structure that usually ranges from off-white to pale yellow in appearance. Its physical format arrives most often as flakes, fine powder, or solid chunks, occasionally described as pearls given certain preparation methods. Its melting point typically falls within the moderate range for organosilicon molecules, sitting comfortably above room temperature. Given the bulky tert-butyldimethylsilyl and triphenylphosphoranylidene groups, this material delivers a high molecular mass, generally beyond 500 g/mol, with a density close to 1.1–1.3 g/cm³, varying with crystalline form and preparation purity.

Molecular Structure and Formula

The molecule stands out because it brings together protective and reactive groups that influence both stability and versatility. The tert-butyldimethylsilyl unit prevents unwanted side-reactions of the hydroxy during synthesis, a feature consistently vital for multi-step organic chemistry. The formula, C37H49O3P Si, shows a strong influence from both organic and organosilicon chemistry. The triphenylphosphoranylidene group, recognizable from Wittig chemistry, grants the compound electrophilic properties while also affecting solubility, keeping the molecule mainly confined to organic-phase solvents. The electron-withdrawing carbonyl and ylide functionalities play off each other, making the molecule well suited for further diversification.

Forms and Physical Presentation

Availability as solid powder or crystalline flakes streamlines its use across research, pilot, and production laboratories, letting researchers measure and transfer it with limited loss. The compound handles air and moisture reasonably well due to the steric bulk of both the silyl and phosphoranylidene arms, although long exposure may still compromise sensitive moieties. It lacks strong color or odor, a point of interest from a bench safety perspective as hazardous materials should not always be assumed obvious through sense alone. As a solid with moderate melting and good stability, it transports safely in sealed glass or polymer containers, avoiding the high volatility and flammability risks seen in low-boiling ethers or some organophosphorus compounds.

Molecular Properties and Safety

Its relative inertness makes handling straightforward with standard lab precautions, yet triphenylphosphoranylidene and tert-butyldimethylsilyl fragments each have their own risks. Solutions, whether in dichloromethane or THF, remain relatively stable, but as always the presence of organosilicon residues and phosphorus means gloves, goggles, and fume hood work are necessary. Inhalation of powder or dust can irritate mucous membranes, so local extraction remains best practice. Contact with acids or moisture should be minimized to avoid hydrolysis or unwanted side reactions; in my own experience, keeping desiccants handy pays off during long syntheses. Its triphenylphosphoranylidene earner delivers both air- and light-sensitivity depending on the environment, bringing a need for storage in amber glass or foil-wrapped containers, labeled with clear hazardous chemical markings.

Raw Materials and Sourcing

To make this compound, chemists combine methyl 3-hydroxyhexanoate derivatives, tert-butyldimethylsilyl chloride for silyl protection, and a Wittig reagent preparation derived from triphenylphosphine. Each precursor follows its own regulatory trail. Silylation procedures require strictly anhydrous conditions, often run under nitrogen or argon atmospheres using standard Schlenk techniques. The triphenylphosphoranylidene segment grows into the molecule through long-known phosphonium ylide methodologies, tying the product back to basic phosphorus handling regulations. Storage as a raw material brings responsibility for tracking the HS Code matched to specialty organic intermediates—usually classed under 2931 (other organo-inorganic compounds) for international transport. Every kilogram shipped or received should travel with Material Safety Data Sheets specifying hazard identifications and recommending first aid in case of accidental contact or exposure.

Hazards and Harmful Effects

Not every synthetic organic intermediate arrives with a clear summary of risks, but experience shows that this class commands some respect. Physical properties—non-volatile, crystalline—don’t guarantee complete safety. Triphenylphosphoranylidene fragments show slow decomposition in air, releasing trace organophosphorus compounds known for moderate toxicity. Silyl-protected compounds, as a group, don’t explode or ignite easily, but releasing silanols or silyl chlorides during improper disposal has brought headaches in countless teaching labs. While no strong acute dangers shine through, supporting workers with up-to-date hazard training on phosphorus and silicon reagents pays off. Proper labeling, secure containers, clear access to MSDS packets, and neutralizing stations with basic first aid reduce both real and perceived risks in a facility handling this raw material.

Importance in Research and Applications

Few compounds offer as much leverage for further functionalization, which means methyl (3R)-3-[(tert-butyldimethylsilyl)oxy]-5-oxo-6-(triphenylphosphoranylidene)hexanoate occupies a favored slot in complex molecule development projects. Having worked in synthesis-driven labs, I’ve seen first-hand how the right protecting group, silyl or otherwise, enables complex transformations without needing to tear down expensive intermediates. The ylide site, used with Wittig or related transformations, supports new C–C bonds with predictable stereochemistry, essential for making chiral, high-value medicines or advanced materials. Whether the goal is pharmaceuticals, agrochemicals, or smart materials, this raw material’s flexibility, reactivity, and well-understood safety profile assure its place in the modern chemist’s inventory.